>MYB-related_37  [length=1201] [hit_def=putative MCB2 protein [Oryza sativa (japonica cultivar-group)]] [comment=full length] [delivery_date=2007-05-03]
TCTTGTACTGACAAATAATAATTACATCTCAATATAATCCGAAATAAATT
ATGGTCGGTGCATTATATGAATTCTCACAGACCATATTACTTCACTTAAA
CTTATCCTAAGCCAATATTATGCAAAAATCTCTATAAGGTCATCTTGCAC
TATGGTATAAAAAGAATTATTTGCATGATCATGTCACCTATAAGTCAATT
ACAAGTAAGTCTCTATAATAAACATTTGCTAATAAACTCGTAAATTTGGT
AACTAAACAATTATGACAAGTTAAACTGCACTAATTCTATAAAGAAAAAA
TAATTATCACTGCATGTAACTTAAATGTTATGTTGCTCGGATCCTCCAAA
GATGGGGTCGCACTCATGTTAGATGCTTCAAATGCATTATTTCTTGAGAA
TATCATACACAAGTATGGCGGTAATTTTTGAAAGCTTCAAATAACATAGC
TTAAATATTTCTTGAGAATATCATACATAATTTTTGAAATTATGGATAAA
AATAGTTGGTGTCATTAAAGCAAAAATATTTACCATGTCAAATAGGCTGG
AACGTCGTTTCTTTTTGTTGAGACTTGAATGTCTTAGAAAATACTTTTGA
GCATGACTTGCAACTTGAGTTGGTGTCCTTGTTGTCACAAAGTTTCTTGA
AATTCCTCTCCAATCTCCTTTTCCTAGCTTTTCTAGTCCAATTAAGAATT
TTCTGTGTTCCTCCTCTGTCCATGGCGCTCCTGTTTATCCAATATAAATG
AGTATCAATAATCACATTATCACTATATGAATCATCACTATCATGCCGTT
CCATTTAAGTTATAAATAGATCTCGTCCTCCTAGATTTCCCGAAGGTAAT
GCCAATGTGAATTTGCTCACATTGTCAATCCAAATATAAAAAAGGTGGGT
CGTGATAGATTGACAGCAAACCTAAAACTAGTCAATTTATGAAAAATTCT
CACGGTTCATAAAAAATGCATGTCTTTGTGACACTACGCAAATAGGAGAA
ATACGAGTGAAAGCTGATGATTCTCGGTCACTCACCCCCAAGTGATGAAG
CCAAAAATTCAATAACCTTTGGCCATACATGCCCCTCCCCTCCCACACAC
ACCCAACACCCAACACCCCCCCCCCCCCCCCCAAAAAAAAAAGAAAATAT
TTTGGATATGACCTTAATTTTGAACCAAAGGCAAATAAAATTACAAGTAT
G


Pfam accession: Myb_DNA-binding
Brief BLAST results against the "ESTobacco" dataset.

TOBFAC ID Accesion E Value Bit Score Definition


Brief BLAST results against the "GenBank Protein" dataset.

TOBFAC ID Accession E Value Bit Score Definition
MYB-related_37 BAD72233 3.00318e-20 102.064 putative MCB2 protein [Oryza sativa (japonica cultivar-group)]
MYB-related_37 AAM60886 6.69039e-20 100.908 Myb-related transcription activator-like [Arabidopsis thaliana]
MYB-related_37 BAA97173 6.69039e-20 100.908 Myb-related transcription activator-like [Arabidopsis thaliana]
MYB-related_37 AAS09986 6.69039e-20 100.908 MYB transcription factor [Arabidopsis thaliana]
MYB-related_37 AAM20295 6.69039e-20 100.908 putative Myb-related transcription activator [Arabidopsis thaliana]


Component TGI GSRs via NCBI:

ET045821

ET047798

ET041937

Papers related to tobacco and family MYB-related:

Suzuki K, Nishiuchi T, Nakayama Y, Ito M, Shinshi H Elicitor-induced down-regulation of cell cycle-related genes in tobacco cells PLANT CELL AND ENVIRONMENT 29 (2): 183-191 2006 PMID: 17080634

Rowland,O., Ludwig,A.A., Merrick,C.J., Baillieul,F., Tracy,F.E., Durrant,W.E., Fritz-Laylin,L., Nekrasov,V., Sjolander,K., Yoshioka,H. and Jones,J.D. Functional Analysis of Avr9/Cf-9 Rapidly Elicited Genes Identifies a Protein Kinase, ACIK1, That Is Essential for Full Cf-9-Dependent Disease Resistance in Tomato PLANT CELL 17 (1): 295-310 2005 PMID: 15598806

McHale NA, Koning RE. PHANTASTICA regulates development of the adaxial mesophyll in Nicotiana leaves. PLANT CELL 16 (5):1251-62 2004 PMID: 15084717

Araki S, Ito M, Soyano T, Nishihama R, Machida Y Mitotic cyclins stimulate the activity of c-Myb-like factors for transactivation of G(2)/M phase-specific genes in tobacco JOURNAL OF BIOLOGICAL CHEMISTRY 279 (31): 32979-32988 2004 PMID: 15175336

Kyo,M., Hattori,S., Yamaji,N., Pechan,P. and Fukui,H. Cloning and characterization of cDNAs associated with the embryogenic dedifferentiation of tobacco immature pollen grains PLANT SCIENCE 164: 1057-1066 2003 http://www.sciencedirect.com/science?_ob=ArticleURL&_udi=B6TBH-486BPW1-1&_user=709071&_coverDate=06%2F30%2F2003&_rdoc=1&_fmt=&_orig=search&_sort=d&view=c&_acct=C000039638&_version=1&_urlVersion=0&_userid=709071&md5=bea469f86d86456acadea8f5326b36e9

Ito M, Araki S, Matsunaga S, Itoh T, Nishihama R, Machida Y, Doonan JH, Watanabe A G2/M-phase-specific transcription during the plant cell cycle is mediated by c-Myb-like transcription factors PLANT CELL 13 (8): 1891-1905 2001 PMID: 11487700

Yang,S., Sweetman,J.P., Amirsadeghi,S., Barghchi,M., Huttly,A.K., Chung,W.I. and Twell,D. Novel anther-specific myb genes from tobacco as putative regulators of phenylalanine ammonia-lyase expression PLANT PHYSIOLOGY 126 (4): 1738-1753 2001 PMID: 11500571

Sugimoto,K., Takeda,S. and Hirochika,H. MYB-related transcription factor NtMYB2 induced by wounding and elicitors is a regulator of the tobacco retrotransposon Tto1 and defense-related genes PLANT CELL 12 (12): 2511-2528 2000 PMID: 11148294

Payne T, Clement J, Arnold D, Lloyd A Heterologous myb genes distinct from GL1 enhance trichome production when overexpressed in Nicotiana tabacum DEVELOPMENT 126 (4): 671-682 1999 PMID: 9895315

Yang,Y. and Klessig,D.F. Isolation and characterization of a tobacco mosaic virus-inducible myb oncogene homolog from tobacco PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA 93 (25): 14972-14977 1996 PMID: 8962166



Tobacco published genes related to transcription factor family MYB-related
Family Genbank ID Name PMID


Six frame translation of MYB-related_37
>MYB-related_37_1 [tobfac_id=MYB-related_37] [frame=1]
SCTDK**LHLNIIRNKLWSVHYMNSHRPYYFT*TYPKPILCKNLYKVILHYGIKRIICMI
MSPISQLQVSLYNKHLLINS*IW*LNNYDKLNCTNSIKKK*LSLHVT*MLCCSDPPKMGS
HSC*MLQMHYFLRISYTSMAVIFESFK*HSLNIS*EYHT*FLKLWIKIVGVIKAKIFTMS
NRLERRFFLLRLECLRKYF*A*LAT*VGVLVVTKFLEIPLQSPFPSFSSPIKNFLCSSSV
HGAPVYPI*MSINNHIITI*IITIMPFHLSYK*ISSS*ISRR*CQCEFAHIVNPNIKKVG
RDRLTANLKLVNL*KILTVHKKCMSL*HYANRRNTSES**FSVTHPQVMKPKIQ*PLAIH
APPLPHTPNTQHPPPPPQKKKKIFWI*P*F*TKGK*NYKYX
>MYB-related_37_2 [tobfac_id=MYB-related_37] [frame=2]
LVLTNNNYISI*SEINYGRCII*ILTDHITSLKLILSQYYAKISIRSSCTMV*KELFA*S
CHL*VNYK*VSIINIC**TRKFGN*TIMTS*TALIL*RKNNYHCM*LKCYVARILQRWGR
THVRCFKCIIS*EYHTQVWR*FLKASNNIA*IFLENIIHNF*NYG*K*LVSLKQKYLPCQ
IGWNVVSFC*DLNVLENTFEHDLQLELVSLLSQSFLKFLSNLLFLAFLVQLRIFCVPPLS
MALLFIQYK*VSIITLSLYESSLSCRSI*VINRSRPPRFPEGNANVNLLTLSIQI*KRWV
VID*QQT*N*SIYEKFSRFIKNACLCDTTQIGEIRVKADDSRSLTPK**SQKFNNLWPYM
PLPSHTHPTPNTPPPPPKKKRKYFGYDLNFEPKANKITSM
>MYB-related_37_3 [tobfac_id=MYB-related_37] [frame=3]
LY*QIIITSQYNPK*IMVGALYEFSQTILLHLNLS*ANIMQKSL*GHLALWYKKNYLHDH
VTYKSITSKSL**TFANKLVNLVTKQL*QVKLH*FYKEKIIITACNLNVMLLGSSKDGVA
LMLDASNALFLENIIHKYGGNF*KLQIT*LKYFLRISYIIFEIMDKNSWCH*SKNIYHVK
*AGTSFLFVET*MS*KILLSMTCNLSWCPCCHKVS*NSSPISFS*LF*SN*EFSVFLLCP
WRSCLSNINEYQ*SHYHYMNHHYHAVPFKL*IDLVLLDFPKVMPM*ICSHCQSKYKKGGS
**IDSKPKTSQFMKNSHGS*KMHVFVTLRK*EKYE*KLMILGHSPPSDEAKNSITFGHTC
PSPPTHTQHPTPPPPPPKKKENILDMTLILNQRQIKLQVX
>MYB-related_37_4 [tobfac_id=MYB-related_37] [frame=-1]
ILVILFAFGSKLRSYPKYFLFFLGGGGGVLGVGCVWEGRGMYGQRLLNFWLHHLGVSDRE
SSAFTRISPICVVSQRHAFFMNRENFS*ID*F*VCCQSITTHLFYIWIDNVSKFTLALPS
GNLGGRDLFIT*MERHDSDDSYSDNVIIDTHLYWINRSAMDRGGTQKILNWTRKARKRRL
ERNFKKLCDNKDTNSSCKSCSKVFSKTFKSQQKETTFQPI*HGKYFCFNDTNYFYP*FQK
LCMIFSRNI*AMLFEAFKNYRHTCV*YSQEIMHLKHLT*VRPHLWRIRAT*HLSYMQ**L
FFLYRISAV*LVIIV*LPNLRVY*QMFIIETYL*LTYR*HDHANNSFYTIVQDDLIEIFA
*YWLRISLSEVIWSVRIHIMHRP*FISDYIEM*LLFVSTR
>MYB-related_37_5 [tobfac_id=MYB-related_37] [frame=-2]
HTCNFICLWFKIKVISKIFSFFFGGGGGGVGCWVCVGGEGHVWPKVIEFLASSLGGE*PR
IISFHSYFSYLRSVTKTCIFYEP*EFFIN*LVLGLLSIYHDPPFLYLD*QCEQIHIGITF
GKSRRTRSIYNLNGTA****FI***CDY*YSFILDKQERHGQRRNTENS*LD*KS*EKEI
GEEFQETL*QQGHQLKLQVMLKSIF*DIQVSTKRNDVPAYLTW*IFLL**HQLFLSIISK
IMYDILKKYLSYVI*SFQKLPPYLCMIFSRNNAFEASNMSATPSLEDPSNITFKLHAVII
IFSL*N*CSLTCHNCLVTKFTSLLANVYYRDLLVIDL*VT*SCK*FFLYHSAR*PYRDFC
IILA*DKFK*SNMVCENSYNAPTIIYFGLY*DVIIICQYKX
>MYB-related_37_6 [tobfac_id=MYB-related_37] [frame=-3]
YL*FYLPLVQN*GHIQNIFFFFWGGGGGCWVLGVCGRGGACMAKGY*IFGFITWG*VTEN
HQLSLVFLLFA*CHKDMHFL*TVRIFHKLTSFRFAVNLSRPTFFIFGLTM*ANSHWHYLR
EI*EDEIYL*LKWNGMIVMIHIVIM*LLILIYIG*TGAPWTEEEHRKFLIGLEKLGKGDW
RGISRNFVTTRTPTQVASHAQKYFLRHSSLNKKKRRSSLFDMVNIFALMTPTIFIHNFKN
YV*YSQEIFKLCYLKLSKITAILVYDILKK*CI*SI*HECDPIFGGSEQHNI*VTCSDNY
FFFIELVQFNLS*LFSYQIYEFISKCLL*RLTCN*LIGDMIMQIILFIP*CKMTL*RFLH
NIGLG*V*VK*YGL*EFI*CTDHNLFRIILRCNYYLSVQX


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