List of papers for tobacco transcriptions factors
ABI

None



Alfin

None



AP2

Shen YG, Yan DQ, Zhang WK,Du BX, Zhang JS, Liu Q, Chen SY Novel halophyte EREBP/AP2-type DNA binding protein improves salt tolerance in transgenic tobacco ACTA BOTANICA SINICA 45 (1): 82-87 2003 http://www.jipb.net/pubsoft/content/2/2312/X010607(PS2).pdf



ARF

Alvarez JP, Pekker I, Goldshmidt A, Blum E, Amsellem Z, Eshed Y Endogenous and synthetic microRNAs stimulate simultaneous, efficient, and localized regulation of multiple targets in diverse species PLANT CELL 18 (5): 1134-1151 2006 PMID: 16603651



ARID

None



AS2

None



Aux-IAA

Tao LZ, Cheung AY, Nibau C, Wu HM RAC GTPases in tobacco and Arabidopsis mediate auxin-induced formation of proteolytically active nuclear protein bodies that contain AUX/IAA proteins PLANT CELL 17 (8): 2369-2383 2005 PMID: 15994909

Sakai T, Takahashi Y, Nagata T The identification of DNA binding factors specific for as-1-like sequences in auxin-responsive regions of parA, parB and parC PLANT AND CELL PHYSIOLOGY 39 (7): 731-739 1998 PMID: 9729895

Dargeviciute,A., Roux,C., Decreux,A., Sitbon,F. and Perrot-Rechenmann,C. Molecular cloning and expression of the early auxin-responsive Aux/IAA gene family in Nicotiana tabacum PLANT AND CELL PHYSIOLOGY 39 (10): 993-1002 1998 PMID: 9871362

Roux,C., Bilang,J., Theunissen,B.H. and Perrot-Rechenmann,C. Identification of new early auxin markers in tobacco by mRNA differential display PLANT MOLECULAR BIOLOGY 37 (2): 385-389 1998 PMID: 9617809



BBR-BPC

None



BES

None



bHLH

Kodama Y, Sano H Functional diversification of a basic helix-loop-helix protein due to alternative transcription during generation of amphidiploidy in tobacco plants BIOCHEMICAL JOURNAL 403: 493-499 Part 3 2007 PMID: 17288537

Kodama Y, Sano H Evolution of a basic helix-loop-helix protein from a transcriptional repressor to a plastid-resident regulatory factor - Involvement in hypersensitive cell death in tobacco plants JOURNAL OF BIOLOGICAL CHEMISTRY 281 (46): 35369-35380 2006 PMID: 16966334

Pattanaik S, Xie CH, Kong Q, et al. Directed evolution of plant basic helix-loop-helix transcription factors for the improvement of transactivational properties BIOCHIMICA ET BIOPHYSICA ACTA-GENE STRUCTURE AND EXPRESSION 1759 (6): 308-318 2006 PMID: 16837081



bZIP

Ndamukong I, Al Abdallat A, Thurow C, Fode B, Zander M, Weigel R, Gatz C SA-inducible Arabidopsis glutaredoxin interacts with TGA factors and suppresses JA-responsive PDF1.2 transcription PLANT JOURNAL 50 (1): 128-139 2007 PMID: 17397508

Thurow C, Schiermeyer A, Krawczyk S, Butterbrodt T, Nickolov K, Gatz C Tobacco bZIP transcription factor TGA2.2 and related factor TGA2.1 have distinct roles in plant defense responses and plant development PLANT JOURNAL 44 (1): 100-113 2005 PMID: 16167899

Kegler C, Lenk I, Krawczyk S, Scholz R, Gatz C Functional characterization of tobacco transcription factor TGA2.1 PLANT MOLECULAR BIOLOGY 55 (2): 153-164 2004 PMID: 15604672

Heinekamp T, Strathmann A, Kuhlmann M, Froissard M, Muller A, Perrot-Rechenmann C, Droge-Laser W The tobacco bZIP transcription factor BZI-1 binds the GH3 promoter in vivo and modulates auxin-induced transcription PLANT JOURNAL 38 (2): 298-309 2004 PMID: 15078332

Schiermeyer,A., Thurow,C. and Gatz,C. Tobacco bZIP factor TGA10 is a novel member of the TGA family of transcription factors PLANT MOLECULAR BIOLOGY 51 (6): 817-829 2003 PMID: 12777042

Heinekamp,T., Kuhlmann,M., Lenk,A., Strathmann,A. and Droge-Laser,W. The tobacco bZIP transcription factor BZI-1 binds to G-box elements in the promoters of phenylpropanoid pathway genes in vitro, but it is not involved in their regulation in vivo MOLECULAR GENETICS AND GENOMICS 267 (1): 16-26 2002 PMID: 11919711

Strathmann,A., Kuhlmann,M., Heinekamp,T. and Droge-Laser,W. BZI-1 specifically heterodimerises with the tobacco bZIP transcription factors BZI-2, BZI-3/TBZF and BZI-4, and is functionally involved in flower development PLANT JOURNAL 28 (4): 397-408 2001 PMID: 11737777

Igarashi,D., Ishida,S., Fukazawa,J. and Takahashi,Y. 14-3-3 proteins regulate intracellular localization of the bZIP transcriptional activator RSG PLANT CELL 13 (11): 2483-2497 2001 PMID: 11701883

Johnson C, Glover G, Arias J Regulation of DNA binding and trans-activation by a xenobiotic stress-activated plant transcription factor JOURNAL OF BIOLOGICAL CHEMISTRY 276 (1): 172-178 2001 PMID: 11034999

Fukazawa,J., Sakai,T., Ishida,S., Yamaguchi,I., Kamiya,Y. and Takahashi,Y. Repression of shoot growth, a bZIP transcriptional activator, regulates cell elongation by controlling the level of gibberellins PLANT CELL 12 (6): 901-915 2000 PMID: 10852936

Niggeweg,R., Thurow,C., Weigel,R., Pfitzner,U. and Gatz,C. Tobacco TGA factors differ with respect to interaction with NPR1, activation potential and DNA-binding properties PLANT MOLECULAR BIOLOGY 42 (5): 775-788 2000 PMID: 10809449

Ouwerkerk PBF, Memelink J A G-box element from the Catharanthus roseus strictosidine synthase (Str)gene promoter confers seed-specific expression in transgenic tobacco plants MOLECULAR AND GENERAL GENETICS 261 (4-5): 635-643 1999 PMID: 10394900

Pascuzzi P, Hamilton D, Bodily K,Arias J Auxin-induced stress potentiates trans-activation by a conserved plant basic/leucine-zipper factor JOURNAL OF BIOLOGICAL CHEMISTRY 273 (41): 26631-26637 1998 PMID: 9756903

Eckardt NA, McHenry L, Guiltinan MJ Overexpression of Delta EmBP, a truncated dominant negative version of the wheat G-box binding protein EmBP-1, alters vegetative development in transgenic tobacco PLANT MOLECULAR BIOLOGY 38 (4): 539-549 1998 PMID: 9747800

Ringli C, Keller B Specific interaction of the tomato bZIP transcription factor VSF-1 with a non-palindromic DNA sequence that controls vascular gene expression PLANT MOLECULAR BIOLOGY 37 (6): 977-988 1998 PMID: 9700070

LAM E, LAM YKP BINDING-SITE REQUIREMENTS AND DIFFERENTIAL REPRESENTATION OF TGA FACTORS IN NUCLEAR ASF-1 ACTIVITY NUCLEIC ACIDS RESEARCH 23 (18): 3778-3785 1995 PMID: 7479010

Oeda,K., Salinas,J. and Chua,N.H. A tobacco bZip transcription activator (TAF-1)binds to a G-box-like motif conserved in plant genes EMBO JOURNAL 10 (7): 1793-1802 1991 PMID: 2050116

Katagiri,F., Lam,E. and Chua,N.H. Two tobacco DNA-binding proteins with homology to the nuclear factor CREB NATURE 340 (6236): 727-730 1989 PMID: 2528073



C2C2-GATA

Sugimoto,K., Takeda,S. and Hirochika,H. Transcriptional activation mediated by binding of a plant GATA-type zinc finger protein AGP1 to the AG-motif (AGATCCAA)of the wound-inducible Myb gene NtMyb2 PLANT JOURNAL 36 (4): 550-564 2003 PMID: 14617085

Teakle GR, Kay SA The GATA-binding protein CGF-1 is closely related to GT-1 PLANT MOLECULAR BIOLOGY 29 (6): 1253-1266 1995 PMID: 8616222

Daniel-Vedele,F. and Caboche,M. A tobacco cDNA clone encoding a GATA-1 zinc finger protein homologous to regulators of nitrogen metabolism in fungi MOLECULAR AND GENERAL GENETICS 240 (3): 365-373 1993 PMID: 8413186



C2H2

Mitsuya Y, Takahashi Y, Uehara Y, Berberich T, Miyazaki A, Takahashi H, Kusano T. Identification of a novel Cys2/His2-type zinc-finger protein as a component of a spermine-signaling pathway in tobacco. JOURNAL OF PLANT PHYSIOLOGY 164 (6): 785-93 2007 PMID: 16882456

Uehara,Y., Takahashi,Y., Berberich,T., Miyazaki,A., Takahashi,H., Matsui,K., Ohme-Takagi,M., Saitoh,H., Terauchi,R. and Kusano,T. Tobacco ZFT1, a transcriptional repressor with a Cys2/His2 type zinc finger motif that functions in spermine-signaling pathway PLANT MOLECULAR BIOLOGY 59 (3): 435-448 2005 PMID: 16235109



C3H

None



CAMTA

None



CCAAT-Dr1

None



CCAAT-HAP2

None



CCAAT-HAP3

None



CCAAT-HAP5

None



CONSTANS

None



CPP

None



Dof

Yanagisawa S Dof domain proteins: Plant-specific transcription factors associated with diverse phenomena unique to plants PLANT AND CELL PHYSIOLOGY 45 (4): 386-391 2004 PMID: 15111712

Yanagisawa S, Akiyama A, Kisaka H, Uchimiya H, Miwa T Metabolic engineering with Dof1 transcription factor in plants: Improved nitrogen assimilation and growth under low-nitrogen conditions PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA 101 (20): 7833-7838 2004 PMID: 15136740

Umemura Y, Ishiduka T, Yamamoto R, Esaka M The Dof domain, a zinc finger DNA-binding domain conserved only in higher plants, truly functions as a Cys2/Cys2 Zn finger domain PLANT JOURNAL 37 (5): 741-749 2004 PMID: 14871313

Baumann,K., De Paolis,A., Costantino,P. and Gualberti,G. The DNA binding site of the Dof protein NtBBF1 is essential for tissue-specific and auxin-regulated expression of the rolB oncogene in plants PLANT CELL 11 (3): 323-334 1999 PMID: 10072394

De Paolis,A., Sabatini,S., De Pascalis,L., Costantino,P. and Capone,I. A rolB regulatory factor belongs to a new class of single zinc finger plant proteins PLANT JOURNAL 10 (2): 215-223 1996 PMID: 8771779



E2F

Lincker F, Messmer M, Houlne G, Devic M, Chaboute ME E2F factors rate controls the dual role of CDE/E2F composite element: A model of E2F-regulated gene expression in plant development FEBS LETTERS 580 (22): 5167-5171 2006 PMID: 16962586

Uemukai K, Iwakawa H, Kosugi S, de Jager S, Kato K, Kondorosi E, Murray JAH, Ito M, Shinmyo A, Sekine M Transcriptional activation of tobacco E2F is repressed by co-transfection with the retinoblastoma-related protein: cyclin D expression overcomes this repressor activity PLANT MOLECULAR BIOLOGY 57 (1): 83-100 2005 PMID: 15821870

Lincker F, Philipps G, Chaboute ME UV-C response of the ribonucleotide reductase large subunit involves both E2F-mediated gene transcriptional regulation and protein subcellular relocalization in tobacco cells NUCLEIC ACIDS RESEARCH 32 (4): 1430-1438 2004 PMID: 14990748

Kosugi S, Ohashi Y Constitutive E2F expression in tobacco plants exhibits altered cell cycle control and morphological change in a cell type-specific manner PLANT PHYSIOLOGY 132 (4): 2012-2022 2003 PMID: 12913157

Kosugi S, Ohashi Y E2F sites that can interact with E2F proteins cloned from rice are required for meristematic tissue-specific expression of rice and tobacco proliferating cell nuclear antigen promoters PLANT JOURNAL 29 (1): 45-59 2002 PMID: 12060226

Chaboute ME, Clement B, Philipps G S phase and weristem-specific expression of the tobacco RNR1b gene is mediated by an E2F element located in the 5 ' leader sequence JOURNAL OF BIOLOGICAL CHEMISTRY 277 (20): 17845-17851 2002 PMID: 11884409

Egelkrout EM, Mariconti L, Settlage SB,Cella R, Robertson D, Hanley-Bowdoin L Two E2F elements regulate the proliferating cell nuclear antigen promoter differently during leaf development PLANT CELL 14 (12): 3225-3236 2002 PMID: 12468739

Chaboute ME, Clement B, Sekine M, Philipps G, Chaubet-Gigot N Cell cycle regulation of the tobacco ribonucleotide reductase small subunit gene is mediated by E2F-like elements PLANT CELL 12 (10): 1987-1999 2000 PMID: 11041892

Sekine,M., Ito,M., Uemukai,K., Maeda,Y., Nakagami,H. and Shinmyo,A. Isolation and characterization of the E2F-like gene in plants FEBS LETTERS 460 (1): 117-122 1999 PMID: 10571072



EIL

Lee JH, Kim WT Molecular and biochemical characterization of VR-EILs encoding Mung bean ETHYLENE INSENSITIVE3-LIKE proteins PLANT PHYSIOLOGY 132 (3): 1475-1488 2003 PMID: 12857828

Rieu I, Mariani C, Weterings K Expression analysis of five tobacco EIN3 family members in relation to tissue-specific ethylene responses JOURNAL OF EXPERIMENTAL BOTANY 54 (391): 2239-2244 2003 PMID: 12909687



ERF

Srinivasan C, Liu ZR, Heidmann I, Supena EDJ, Fukuoka H, Joosen R, Lambalk J, Angenent G, Scorza R, Custers JBM, Boutilier K Heterologous expression of the BABY BOOM AP2/ERF transcription factor enhances the regeneration capacity of tobacco (Nicotiana tabacum L.) PLANTA 225 (2): 341-351 2007 PMID: 16924539

Zhang HB, Li WZ, Chen J, Yang YH, Zhang ZJ, Zhang HW, Wang XC, Huang RF Transcriptional activator TSRF1 reversely regulates pathogen resistance and osmotic stress tolerance in tobacco PLANT MOLECULAR BIOLOGY 63 (1): 63-71 2007 PMID: 17160455

Nakano T, Nishiuchi T, Suzuki K, Fujimura T, Shinshi H Studies on transcriptional regulation of endogenous genes by ERF2 transcription factor in tobacco cells PLANT AND CELL PHYSIOLOGY 47 (4): 554-558 2006 PMID: 16452120

Qin J, Zuo KJ, Zhao JY, Ling H, Cao YF, Qiu CX, Li FP, Sun XF, Tang KX Overexpression of GbERF confers alteration of ethylene-responsive gene expression and enhanced resistance to Pseudomonas syringae in transgenic tobacco JOURNAL OF BIOSCIENCES 31 (2): 255-263 2006 PMID: 16809858

Cao WH, Liu J, Zhou QY, Cao YR, Zheng SF, Du BX, Zhang JS, Chen SY Expression of tobacco ethylene receptor NTHK1 alters plant responses to salt stress PLANT CELL AND ENVIRONMENT 29 (7): 1210-1219 2006 PMID: 17080944

De Sutter V, Vanderhaeghen R, Tilleman S, Lammertyn F, Vanhoutte I, Karimi M, Inze D, Goossens A, Hilson P Exploration of jasmonate signalling via automated and standardized transient expression assays in tobacco cells PLANT JOURNAL 44 (6): 1065-1076 2005 PMID: 16359398

Fischer,U. and Droge-Laser,W. Overexpression of NtERF5, a new member of the tobacco ethylene response transcription factor family enhances resistance to tobacco mosaic virus MOLECULAR PLANT-MICROBE INTERACTIONS 17 (10): 1162-1171 2004 PMID: 15497409

Zhang HW, Huang ZJ, Xie BY, Chen Q, Tian X, Zhang XL, Zhang HB, Lu XY, Huang DF, Huang RF The ethylene-, jasmonate-, abscisic acid- and NaCl-responsive tomato transcription factor JERF1 modulates expression of GCC box-containing genes and salt tolerance in tobacco PLANTA 220 (2): 262-270 2004 PMID: 15300440

Nishiuchi T, Shinshi H, Suzuki K Rapid and transient activation of transcription of the ERF3 gene by wounding in tobacco leaves - Possible involvement of NtWRKYs and autorepression JOURNAL OF BIOLOGICAL CHEMISTRY 279 (53): 55355-55361 2004 PMID: 15509567

Hao DY, Yamasaki K, Sarai A, Ohme-Takagi M Determinants in the sequence specific binding of two plant transcription factors, CBF1 and NtERF2, to the DRE and GCC motifs BIOCHEMISTRY 41 (13): 4202-4208 2002 PMID: 11914065

Nishiuchi,T., Suzuki,K., Kitajima,S., Sato,F. and Shinshi,H. Wounding activates immediate early transcription of genes for ERFs in tobacco plants PLANT MOLECULAR BIOLOGY 49 (5): 473-482 2002 PMID: 12090623

Koyama,T., Kitajima,S. and Sato,F. Expression of PR-5d and ERF genes in cultured tobacco cells and their NaCl stress-response Biosci. Biotechnol. Biochem. 65 (5), 1270-1273 2001 PMID: 11440157

Ohta,M., Ohme-Takagi,M. and Shinshi,H. Three ethylene-responsive transcription factors in tobacco with distinct transactivation functions PLANT JOURNAL 22 (1): 29-38 2000 PMID: 10792818

Ohme-Takagi M, Suzuki K, Shinshi H Regulation of ethylene-induced transcription of defense genes PLANT AND CELL PHYSIOLOGY 41 (11): 1187-1192 2000 PMID: 11092902

Yamamoto,S., Suzuki,K. and Shinshi,H. Elicitor-responsive, ethylene-independent activation of GCC box-mediated transcription that is regulated by both protein phosphorylation and dephosphorylation in cultured tobacco cells PLANT JOURNAL 20 (5): 571-579 1999 PMID: 10652129

Suzuki K, Suzuki N, Ohme-Takagi M, Shinshi H Immediate early induction of mRNAs for ethylene-responsive transcription factors in tobacco leaf strips after cutting PLANT JOURNAL 15 (5): 657-665 1998 PMID: 12090623

Horvath DM, Huang DJ, Chua NH Four classes of salicylate-induced tobacco genes MOLECULAR PLANT-MICROBE INTERACTIONS 11 (9): 895-905 1998 PMID: 9725022

Ohme-Takagi M, Shinshi H. Ethylene-inducible DNA binding proteins that interact with an ethylene-responsive element. Plant Cell 1995 Feb 7(2):173-82 PMID: 7756828


FHA

Kim,M., Ahn,J.W., Song,K., Paek,K.H. and Pai,H.S. Forkhead-associated Domains of the Tobacco NtFHA1 Transcription Activator and the Yeast Fhl1 Forkhead Transcription Factor Are Functionally Conserved JOURNAL OF BIOLOGICAL CHEMISTRY 277 (41): 38781-38790 2002 PMID: 12149245



GARP-ARR-B

None



GARP-G2

None



GeBP

None



GIF

None



GRAS

None



GRF

None



HMG

Ascenzi R, Ingram JL, Massel M, Thompson WF, Spiker S, Weissinger AK The role of cell differentiation state and HMG-I/Y in the expression of transgenes flanked by matrix attachment regions TRANSGENIC RESEARCH 10 (5): 465-470 2001 PMID: 11708656



Homeodomain

Muller KJ, Lin JX, Fischer R, Prufer D How repeated epiphylly correlates with gene expression of resident knox1 in the leaves of tobacco epiphyllous shoots CENTRAL EUROPEAN JOURNAL OF BIOLOGY 1 (2): 263-274 2006 http://springerlink.com/content/9076065778274107/fulltext.pdf

Desvoyes,B., Faure-Rabasse,S., Chen,M.-H., Park,J.-W. and Scholthof,H.B. A novel plant homeodomain protein interacts in a functionally relevant manner with a virus movement protein PLANT PHYSIOLOGY (129): 1521-1532 2002 PMID: 12177465

Sakamoto T, Kamiya N, Ueguchi-Tanaka M, Iwahori S, Matsuoka M KNOX homeodomain protein directly suppresses the expression of a gibberellin biosynthetic gene in the tobacco shoot apical meristem GENES & DEVELOPMENT 15 (5): 581-590 2001 PMID: 11238378

Nishimura A, Tamaoki M, Sakamoto T, Matsuoka M Over-expression of tobacco knotted1-type class1 homeobox genes alters various leaf morphology PLANT AND CELL PHYSIOLOGY 41 (5): 583-590 2000 PMID: 10929941

Sakamoto T, Nishimura A, Tamaoki M, Kuba M, Tanaka H, Iwahori S, Matsuoka M The conserved KNOX domain mediates specificity of tobacco KNOTTED1-type homeodomain proteins PLANT CELL 11 (8): 1419-1431 1999 PMID: 10449577

Nishimura,A., Tamaoki,M., Sato,Y. and Matsuoka,M. The expression of tobacco knotted1-type class 1 homeobox genes correspond to regions predicted by the cytohistological zonation model PLANT JOURNAL 18 (4): 337-347 1999 PMID: 10406119

Sentoku,N., Tamaoki,M., Nishimura,A. and Matsuoka,M. The homeobox gene NTH23 of tobacco is expressed in the basal region of leaf primordia Biochim. Biophys. Acta 1399 (2-3): 203-208 1998 PMID: 9765597

Tamaoki,M., Kusaba,S., Kano-Murakami,Y. and Matsuoka,M. Ectopic expression of a tobacco homeobox gene, NTH15, dramatically alters leaf morphology and hormone levels in transgenic tobacco PLANT AND CELL PHYSIOLOGY 38 (8): 917-927 1997 PMID: 9327591

Meisel L, Lam E The conserved ELK-homeodomain of KNOTTED-1 contains two regions that signal nuclear localization PLANT MOLECULAR BIOLOGY 30 (1): 1-14 1996 PMID: 8616227



HRT

None



HSF

Czarnecka-Verner E, Yuan CX, Scharf KD, Englich G, Gurley WB Plants contain a novel multi-member class of heat shock factors without transcriptional activator potential PLANT MOLECULAR BIOLOGY 43 (4): 459-471 2000 PMID: 11052198

Shoji T, Kato K, Sekine M, Yoshida K, Shinmyo A Two types of heat shock factors in cultured tobacco cells PLANT CELL REPORTS 19 (4): 414-420 2000 http://www.springerlink.com/content/plnmadwmhex76ae0/fulltext.pdf

Lyck R, Harmening U, Hohfeld I,Treuter E, Scharf KD, Nover L Intracellular distribution and identification of the nuclear localization signals of two plant heat-stress transcription factors PLANTA 202 (1): 117-125 1997 PMID: 9177056

Shimizu S, Itoh Y, Yamazaki K Temperature-dependent increase in the DNA-binding activity of a heat shock factor in an extract of tobacco cultured cells PLANT MOLECULAR BIOLOGY 31 (1): 13-22 1996 PMID: 8704146



JUMONJI

None



LFY

None



LIM

Thomas,C., Hoffmann,C., Dieterle,M., Van Troys,M., Ampe,C. and Steinmetz,A. Tobacco WLIM1 Is a Novel F-Actin Binding Protein Involved in Actin Cytoskeleton Remodeling PLANT CELL 18 (9): 2194-2206 2006 PMID: 16905656

Kawaoka A, Ebinuma H Transcriptional control of lignin biosynthesis by tobacco LIM protein PHYTOCHEMISTRY 57 (7): 1149-1157 2001 PMID: 11430987

Kawaoka,A., Kaothien,P., Yoshida,K., Endo,S., Yamada,K. and Ebinuma,H. Functional analysis of tobacco LIM protein Ntlim1 involved in lignin biosynthesis PLANT JOURNAL 22 (4): 289-301 2000 PMID: 10849346



LUG

None



MADS

Steiner,C., Bauer,J., Amrhein,N. and Bucher,M. Two novel genes are differentially expressed during early germination of the male gametophyte of Nicotiana tabacum Biochim. Biophys. Acta 1625 (2): 123-133 2003 PMID: 12531471

Jang,S., An,K., Lee,S. and An,G. Characterization of tobacco MADS-box genes involved in floral initiation PLANT AND CELL PHYSIOLOGY (43): 230-238 2002 PMID: 11867703

Wu YH, Li Q, Zhang JS, Zheng ZF, Xue S, Li Y Molecular cloning and characterization of two tobacco MADS-box genes SEXUAL PLANT REPRODUCTION 13 (3): 163-169 2000 PMID: 9339904

Jang,S., Hong,M.Y., Chung,Y.Y. and An,G. Ectopic expression of tobacco MADS genes modulates flowering time and plant architecture MOLECULES AND CELLS 9 (6): 576-586 1999 PMID: 10672923

Davies,B., Di Rosa,A., Eneva,T., Saedler,H. and Sommer,H. Alteration of tobacco floral organ identity by expression of combinations of Antirrhinum MADS-box genes PLANT JOURNAL 10 (4): 663-677 1996 PMID: 8893543

Kang, HG., Noh, YS., Chung, YY., Costa, MA., An, KS., An, GH. Phenotypic alteration of petal and sepal by ectopic expression of a rice MADS box gene in tobacco PLANT MOLECULAR BIOLOGY 29 (1): 1-10 1995 PMID: 7579155

Kempin,S.A., Mandel,M.A. and Yanofsky,M.F. Conversion of perianth into reproductive organs by ectopic expression of the tobacco floral homeotic gene NAG1 PLANT PHYSIOLOGY 103 (4): 1041-1046 1993 PMID: 7507255

Hansen,G., Estruch,J.J., Sommer,H. and Spena,A. NTGLO: a tobacco homologue of the GLOBOSA floral homeotic gene of Antirrhinum majus: cDNA sequence and expression pattern MOLECULAR AND GENERAL GENETICS 239 (1-2): 310-312 1993 PMID: 8099711



MBF

Matsushita,Y., Miyakawa,O., Deguchi,M., Nishiguchi,M. and Nyunoya,H. Cloning of a tobacco cDNA coding for a putative transcriptional coactivator MBF1 that interacts with the tomato mosaic virus movement protein JOURNAL OF EXPERIMENTAL BOTANY 53 (373): 1531-1532 2002 PMID: 12021302



MYB-related

Suzuki K, Nishiuchi T, Nakayama Y, Ito M, Shinshi H Elicitor-induced down-regulation of cell cycle-related genes in tobacco cells PLANT CELL AND ENVIRONMENT 29 (2): 183-191 2006 PMID: 17080634

Rowland,O., Ludwig,A.A., Merrick,C.J., Baillieul,F., Tracy,F.E., Durrant,W.E., Fritz-Laylin,L., Nekrasov,V., Sjolander,K., Yoshioka,H. and Jones,J.D. Functional Analysis of Avr9/Cf-9 Rapidly Elicited Genes Identifies a Protein Kinase, ACIK1, That Is Essential for Full Cf-9-Dependent Disease Resistance in Tomato PLANT CELL 17 (1): 295-310 2005 PMID: 15598806

McHale NA, Koning RE. PHANTASTICA regulates development of the adaxial mesophyll in Nicotiana leaves. PLANT CELL 16 (5):1251-62 2004 PMID: 15084717

Araki S, Ito M, Soyano T, Nishihama R, Machida Y Mitotic cyclins stimulate the activity of c-Myb-like factors for transactivation of G(2)/M phase-specific genes in tobacco JOURNAL OF BIOLOGICAL CHEMISTRY 279 (31): 32979-32988 2004 PMID: 15175336

Kyo,M., Hattori,S., Yamaji,N., Pechan,P. and Fukui,H. Cloning and characterization of cDNAs associated with the embryogenic dedifferentiation of tobacco immature pollen grains PLANT SCIENCE 164: 1057-1066 2003 http://www.sciencedirect.com/science?_ob=ArticleURL&_udi=B6TBH-486BPW1-1&_user=709071&_coverDate=06%2F30%2F2003&_rdoc=1&_fmt=&_orig=search&_sort=d&view=c&_acct=C000039638&_version=1&_urlVersion=0&_userid=709071&md5=bea469f86d86456acadea8f5326b36e9

Ito M, Araki S, Matsunaga S, Itoh T, Nishihama R, Machida Y, Doonan JH, Watanabe A G2/M-phase-specific transcription during the plant cell cycle is mediated by c-Myb-like transcription factors PLANT CELL 13 (8): 1891-1905 2001 PMID: 11487700

Yang,S., Sweetman,J.P., Amirsadeghi,S., Barghchi,M., Huttly,A.K., Chung,W.I. and Twell,D. Novel anther-specific myb genes from tobacco as putative regulators of phenylalanine ammonia-lyase expression PLANT PHYSIOLOGY 126 (4): 1738-1753 2001 PMID: 11500571

Sugimoto,K., Takeda,S. and Hirochika,H. MYB-related transcription factor NtMYB2 induced by wounding and elicitors is a regulator of the tobacco retrotransposon Tto1 and defense-related genes PLANT CELL 12 (12): 2511-2528 2000 PMID: 11148294

Payne T, Clement J, Arnold D, Lloyd A Heterologous myb genes distinct from GL1 enhance trichome production when overexpressed in Nicotiana tabacum DEVELOPMENT 126 (4): 671-682 1999 PMID: 9895315

Yang,Y. and Klessig,D.F. Isolation and characterization of a tobacco mosaic virus-inducible myb oncogene homolog from tobacco PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA 93 (25): 14972-14977 1996 PMID: 8962166



NAC

None



Nin

None



NZZ

None



PcG

None



PHD

None



PLATZ

None



R2R3-MYB

Galis I, Simek P, Narisawa T, Sasaki M, Horiguchi T, Fukuda H, Matsuoka K A novel R2R3 MYB transcription factor NtMYBJS1 is a methyl jasmonate-dependent regulator of phenylpropanoid-conjugate biosynthesis in tobacco PLANT JOURNAL 46 (4): 573-592 2006 PMID: 16640595

Deluc L, Barrieu F, Marchive C, Lauvergeat V, Decendit A, Richard T, Carde JP, Merillon JM, Hamdi S Characterization of a grapevine R2R3-MYB transcription factor that regulates the phenylpropanoid pathway PLANT PHYSIOLOGY 140 (2): 499-511 2006 PMID: 16384897

Aharoni A, De Vos CHR, Wein M, Sun ZK, Greco R, Kroon A, Mol JNM, O'Connell AP The strawberry FaMYB1 transcription factor suppresses anthocyanin and flavonol accumulation in transgenic tobacco PLANT JOURNAL 28 (3): 319-332 2001 PMID: 11722774

Tamagnone L, Merida A, Parr A, Mackay S, Culianez-Macia FA, Roberts K, Martin C The AmMYB308 and AmMYB330 transcription factors from antirrhinum regulate phenylpropanoid and lignin biosynthesis in transgenic tobacco PLANT CELL 10 (2): 135-154 1998 PMID: 9490739



S1Fa

None



SAP

None



SBP

None



SRS

None



TAZ

Afonso,C.L. The callus associated protein (CAP)gene of Nicotiana tabacum: Isolation, characterization and evidence for possible function as a transcriptional factor IN VITRO CELLULAR & DEVELOPMENTAL BIOLOGY – PLANT 30 (1): 1054-5476 1994 http://www.springerlink.com/content/x152n53253143488/



TCP

Kosugi S, Ohashi Y DNA binding and dimerization specificity and potential targets for the TCP protein family PLANT JOURNAL 30 (3): 337-348 2002 PMID: 12000681



Trihelix

None



TULP

None



ULT

None



VOX

None



Whirly

None



WRKY

Heidenreich B, Bieber E, Sandermann H, Ernst D . Identification of a new member of the WRKY family in tobacco. Involved in ozone-induced gene regulation? ACTA PHYSIOLOGIAE PLANTARUM 28 (2): 117-125 2006 http://www.springerlink.com/content/jx32413038vvu4t3/fulltext.pdf

Yamamoto,S., Nakano,T., Suzuki,K. and Shinshi,H. Elicitor-induced activation of transcription via W box-related cis-acting elements from a basic chitinase gene by WRKY transcription factors in tobacco Biochim. Biophys. Acta 1679 (3): 279-287 2004 PMID: 15358520

Navarro,L., Zipfel,C., Rowland,O., Keller,I., Robatzek,S., Boller,T. and Jones,J.D. The Transcriptional Innate Immune Response to flg22. Interplay and Overlap with Avr Gene-Dependent Defense Responses and Bacterial Pathogenesis PLANT PHYSIOLOGY 135 (2): 1113-1128 2004 PMID: 15181213

Liu YL, Schiff M, Dinesh-Kumar SP Involvement of MEK1 MAPKK, NTF6 MAPK, WRKY/MYB transcription factors, COI1 and CTR1 in N-mediated resistance to tobacco mosaic virus PLANT JOURNAL 38 (5): 800-809 2004 PMID: 15144381

Kim CY, Zhang SQ Activation of a mitogen-activated protein kinase cascade induces WRKY family of transcription factors and defense genes in tobacco PLANT JOURNAL 38 (1): 142-151 2004 PMID: 15053767

Nishiuchi T, Shinshi H, Suzuki K Rapid and transient activation of transcription of the ERF3 gene by wounding in tobacco leaves - Possible involvement of NtWRKYs and autorepression JOURNAL OF BIOLOGICAL CHEMISTRY 279 (53): 55355-55361 2004 PMID: 15509567

Xu YH, Wang JW, Wang S, Wang JY, Chen XY Characterization of GaWRKY1, a cotton transcription factor that regulates the sesquiterpene synthase gene (+)-delta-cadinene synthase-A PLANT PHYSIOLOGY 135 (1): 507-515 2004 PMID: 15133151

Takemoto,D., Yoshioka,H., Doke,N. and Kawakita,K. Disease stress-inducible genes of tobacco: expression profile of elicitor-responsive genes isolated by subtractive hybridization PHYSIOLOGIA PLANTARUM 118: 545-553 2003 http://www.blackwell-synergy.com/doi/abs/10.1034/j.1399-3054.2003.00145.x

Yoda H, Ogawa M, Yamaguchi Y, Koizumi N, Kusano T, Sano H Identification of early-responsive genes associated with the hypersensitive response to tobacco mosaic virus and characterization of a WRKY-type transcription factor in tobacco plants MOLECULAR GENETICS AND GENOMICS 267 (2): 154-161 2002 PMID: 11976958

Maeo,K., Hayashi,S., Kojima-Suzuki,H., Morikami,A. and Nakamura,K. Role of conserved residues of the WRKY domain in the DNA-binding of tobacco WRKY family proteins Biosci. Biotechnol. Biochem. 65 (11): 2428-2436 2001 PMID: 11791715

Hara,K., Yagi,M., Kusano,T. and Sano,H. Rapid systemic accumulation of transcripts encoding a tobacco WRKY transcription factor upon wounding MOLECULAR AND GENERAL GENETICS 263 (1): 30-37 2000 PMID: 10732671

Chen,C. and Chen,Z. Isolation and characterization of two pathogen- and salicylic acid-induced genes encoding WRKY DNA-binding proteins from tobacco PLANT MOLECULAR BIOLOGY 42 (2): 387-396 2000 PMID: 10794538

Yang PZ, Chen CH, Wang ZP, Fan BF, Chen ZX A pathogen- and salicylic acid-induced WRKY DNA-binding activity recognizes the elicitor response element of the tobacco class I chitinase gene promoter PLANT JOURNAL 18 (2): 141-149 1999 http://www.blackwell-synergy.com/doi/abs/10.1046/j.1365-313X.1999.00437.x



YABBY

Lee,J.Y., Baum,S.F., Oh,S.H., Jiang,C.Z., Chen,J.C. and Bowman,J.L. Recruitment of CRABS CLAW to promote nectary development within the eudicot clade DEVELOPMENT 132 (22): 5021-5032 2005 PMID: 16236772



ZF-HD

See Homeodomain



ZIM

None





Authors of this site:

Paul J Rushton
Marta T. Bokowiec
Xianfeng (Jeff) Chen
Thomas (Tom) W Laudeman
Jennifer F. Brannock
Michael P. Timko

Contact:
pr8y@virginia.edu

Acknowledgements:


Tobacco leaf graphic used under Creative Commons license.